USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: TBA1C_HUMAN USC-OGP 2-DE database:  TBA1C_HUMAN TBA1C_HUMAN General information about the entry View entry in simple text format Entry name TBA1C_HUMAN Primary accession number Q9BQE3 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Tubulin alpha-1C chain; AltName: Full=Alpha-tubulin 6; AltName: Full=Tubulin alpha-6 chain; Contains: RecName: Full=Detyrosinated tubulin alpha-1C chain;. Gene name Name=TUBA1C Synonyms=TUBA6 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1201: pI=5.96; Mw=39564 Cross-references UniProtKB/Swiss-Prot Q9BQE3; TBA1C_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name TBA1C_HUMAN Primary accession number Q9BQE3 Sequence was last modified on  June 1, 2001 (version 1) Annotations were last modified on  March 15, 2017 (version 161) Name and origin of the protein Description RecName: Full=Tubulin alpha-1C chain; AltName: Full=Alpha-tubulin 6; AltName: Full=Tubulin alpha-6 chain; Contains: RecName: Full=Detyrosinated tubulin alpha-1C chain; Gene name Name=TUBA1C Synonyms=TUBA6 Encoded on Name=TUBA1C; Synonyms=TUBA6 Keywords Acetylation; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; GTP-binding; Methylation; Microtubule; Nitration; Nucleotide-binding; Phosphoprotein; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL BC004949; AAH04949.1; -; mRNA EMBL BC005946; AAH05946.1; -; mRNA EMBL BC011790; AAH11790.1; -; mRNA EMBL BC019298; AAH19298.1; -; mRNA EMBL BC021088; AAH21088.1; -; mRNA EMBL BC051297; AAH51297.1; -; mRNA EMBL BC063036; AAH63036.1; -; mRNA CCDS CCDS8782.1; -; . RefSeq NP_116093.1; NM_032704.4; . UniGene Hs.652390; -; . UniGene Hs.739076; -; . ProteinModelPortal Q9BQE3; -; . SMR Q9BQE3; -; . BioGrid 124259; 178; . IntAct Q9BQE3; 160; . MINT MINT-3060519; -; . STRING 9606.ENSP00000301072; -; . ChEMBL CHEMBL2095182; -; . DrugBank DB05147; CYT997; . DrugBank DB03010; Epothilone B; . DrugBank DB01873; Epothilone D; . iPTMnet Q9BQE3; -; . PhosphoSitePlus Q9BQE3; -; . SwissPalm Q9BQE3; -; . BioMuta TUBA1C; -; . DMDM 20455322; -; . REPRODUCTION-2DPAGE Q9BQE3; -; . EPD Q9BQE3; -; . MaxQB Q9BQE3; -; . PaxDb Q9BQE3; -; . PeptideAtlas Q9BQE3; -; . PRIDE Q9BQE3; -; . TopDownProteomics Q9BQE3; -; . DNASU 84790; -; . Ensembl ENST00000301072; ENSP00000301072; ENSG00000167553; . GeneID 84790; -; . KEGG hsa:84790; -; . UCSC uc001rtt.2; human; . CTD 84790; -; . DisGeNET 84790; -; . GeneCards TUBA1C; -; . HGNC HGNC:20768; TUBA1C; . HPA HPA039247; -; . HPA HPA043684; -; . HPA HPA063394; -; . neXtProt NX_Q9BQE3; -; . OpenTargets ENSG00000167553; -; . PharmGKB PA162407345; -; . eggNOG KOG1376; Eukaryota; . eggNOG COG5023; LUCA; . GeneTree ENSGT00760000119060; -; . HOVERGEN HBG000089; -; . InParanoid Q9BQE3; -; . KO K07374; -; . PhylomeDB Q9BQE3; -; . TreeFam TF300314; -; . Reactome R-HSA-1445148; Translocation of GLUT4 to the plasma membrane; . Reactome R-HSA-190840; Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane; . Reactome R-HSA-190861; Gap junction assembly; . Reactome R-HSA-2132295; MHC class II antigen presentation; . Reactome R-HSA-2467813; Separation of Sister Chromatids; . Reactome R-HSA-2500257; Resolution of Sister Chromatid Cohesion; . Reactome R-HSA-380320; Recruitment of NuMA to mitotic centrosomes; . Reactome R-HSA-389957; Prefoldin mediated transfer of substrate to CCT/TriC; . Reactome R-HSA-389960; Formation of tubulin folding intermediates by CCT/TriC; . Reactome R-HSA-389977; Post-chaperonin tubulin folding pathway; . Reactome R-HSA-437239; Recycling pathway of L1; . Reactome R-HSA-5610787; Hedgehog 'off' state; . Reactome R-HSA-5617833; Cilium Assembly; . Reactome R-HSA-5620924; Intraflagellar transport; . Reactome R-HSA-5626467; RHO GTPases activate IQGAPs; . Reactome R-HSA-5663220; RHO GTPases Activate Formins; . Reactome R-HSA-6807878; COPI-mediated anterograde transport; . Reactome R-HSA-6811434; COPI-dependent Golgi-to-ER retrograde traffic; . Reactome R-HSA-6811436; COPI-independent Golgi-to-ER retrograde traffic; . Reactome R-HSA-68877; Mitotic Prometaphase; . Reactome R-HSA-8852276; The role of GTSE1 in G2/M progression after G2 checkpoint; . Reactome R-HSA-983189; Kinesins; . SIGNOR Q9BQE3; -; . ChiTaRS TUBA1C; human; . GeneWiki TUBA1C; -; . GenomeRNAi 84790; -; . PMAP-CutDB Q9BQE3; -; . PRO PR:Q9BQE3; -; . Proteomes UP000005640; Chromosome 12; . Bgee ENSG00000167553; -; . CleanEx HS_TUBA1C; -; . ExpressionAtlas Q9BQE3; baseline and differential; . Genevisible Q9BQE3; HS; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-KW; . GO GO:0005874; C:microtubule; TAS:BHF-UCL; . GO GO:0015630; C:microtubule cytoskeleton; IDA:HPA; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0031982; C:vesicle; IDA:UniProtKB; . GO GO:0005525; F:GTP binding; IEA:UniProtKB-KW; . GO GO:0003924; F:GTPase activity; IEA:InterPro; . GO GO:0005200; F:structural constituent of cytoskeleton; IEA:InterPro; . GO GO:0005198; F:structural molecule activity; TAS:BHF-UCL; . GO GO:0051301; P:cell division; TAS:BHF-UCL; . GO GO:0030705; P:cytoskeleton-dependent intracellular transport; TAS:BHF-UCL; . GO GO:0007017; P:microtubule-based process; TAS:BHF-UCL; . Gene3D 1.10.287.600; -; 1; . Gene3D 3.30.1330.20; -; 1; . Gene3D 3.40.50.1440; -; 1; . InterPro IPR002452; Alpha_tubulin; . InterPro IPR008280; Tub_FtsZ_C; . InterPro IPR000217; Tubulin; . InterPro IPR018316; Tubulin/FtsZ_2-layer-sand-dom; . InterPro IPR023123; Tubulin_C; . InterPro IPR017975; Tubulin_CS; . InterPro IPR003008; Tubulin_FtsZ_GTPase; . PANTHER PTHR11588; PTHR11588; 1; . Pfam PF00091; Tubulin; 1; . Pfam PF03953; Tubulin_C; 1; . PRINTS PR01162; ALPHATUBULIN; . PRINTS PR01161; TUBULIN; . SMART SM00864; Tubulin; 1; . SMART SM00865; Tubulin_C; 1; . SUPFAM SSF52490; SSF52490; 1; . SUPFAM SSF55307; SSF55307; 1; . PROSITE PS00227; TUBULIN; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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